PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065586.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 157aa    MW: 18293 Da    PI: 9.5392
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer53.84.5e-17252858
     ZF-HD_dimer  8 eClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                    eC++N Aa++ g avDG   +++ ++ +  ++++  Ca CgCHR+FHR+++e
  XP_028065586.1  2 ECRRNYAAHTAGLAVDGLL-YVKITDPTvQNQESYICATCGCHRSFHRKQEE 52
                    9****************87.66655666699******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MECRRNYAAH TAGLAVDGLL YVKITDPTVQ NQESYICATC GCHRSFHRKQ EELNHFAAAA  60
PLSPLPPPRP PRRSHRQPPQ PVPIQPQPDP PKKDWMEMDD ESKPLKKRKM DDKSKPLKKR  120
KAEEELHVLD LATKTRILDE FEINRRRDVR DELWKLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103109KPLKKRK
2106119KKRKMDDKSKPLKK
3106121KKRKMDDKSKPLKKRK
4107122KKRKMDDKSKPLKKRK
5115121KPLKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.16e-09ZF-HD family protein