PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065625.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 212aa    MW: 24621.9 Da    PI: 8.1388
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.42.7e-191791090
            FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    +GFs+rk k ++ + +++i +++f Cskeg++ +e+   eke+ +r etr+gCka +++  e dg w+vt ++ eHnHela
  XP_028065625.1  1 MGFSIRKGKPRYYSGSKNIRQHQFLCSKEGFKIDEDPC-EKEKLNRLETRIGCKAFIRLIVE-DGIWRVTAFNPEHNHELA 79
                    7**********999******************999988.99******************999.****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGFSIRKGKP RYYSGSKNIR QHQFLCSKEG FKIDEDPCEK EKLNRLETRI GCKAFIRLIV  60
EDGIWRVTAF NPEHNHELAL QSERHLLRSA RHISKPKAGV INSMINAGIS TKNAYSYLRE  120
EVGGSENKHT EDPMFFFTVQ VDQENRMTNF FWTDGRSRVD YDCFGDVVVF DTTYRTNKYN  180
LICAPFVGVN HHWQNVMFGC AFLLDETTNS FI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-44FAR1 family protein