PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065653.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 385aa MW: 43712.9 Da PI: 10.1238

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	70.7	1.7e-22	63	128	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rkeksL+ll++kfl+ +++ + + l+++a++L v +rRR+YDi+N+Le+++++++k kn++ wkg XP_028065653.1 63 RKEKSLGLLCSKFLNFYNQDGVDSIGLDDAANRL---GV--ERRRVYDIVNILESVGVLSRKTKNQYFWKG 128 79***************999********.....****************************98 PP
2	E2F_TDP	41.1	3e-13	188	248	1	52
E2F_TDP 1 rkeksLrlltqkflkllek...see.givtlnevakeLvse.....dvknkrRRiYDilNV 52 rke sL+llt++f+kl+ + s + ++l+++a++L+ + +++k+RR+YDi+NV XP_028065653.1 188 RKEISLGLLTMNFVKLFICshlSYIyDLISLDNAATALLGDihdptTMRTKVRRLYDIANV 248 7899**********999665455799******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSLRKSPILA HFTFASIVLI LLLQPPHFFK QLGLANINVQ RFLDEIIKNI HINEWIKPFF 60 AIRKEKSLGL LCSKFLNFYN QDGVDSIGLD DAANRLGVER RRVYDIVNIL ESVGVLSRKT 120 KNQYFWKGFS AIPRALDELK EKALRENFCT SGVFHSANVS SVNHCGGPSN SKTDRKDKPS 180 VSNKVDNRKE ISLGLLTMNF VKLFICSHLS YIYDLISLDN AATALLGDIH DPTTMRTKVR 240 RLYDIANVSL KRLSTQRAGN WHLDDHKHTL SKKSKSESSI DCNSNEKADM PMLMKHNNSK 300 DKHDRSSLEQ QGRYSSKGSV FGPFTPASVP KVGDSGNKNE RRVNLASYRP QYHNQALSDL 360 FAHYVAAWKS WNVEVDEKKQ TQQVS

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSLRKSPILA HFTFASIVLI LLLQPPHFFK QLGLANINVQ RFLDEIIKNI HINEWIKPFF  60
AIRKEKSLGL LCSKFLNFYN QDGVDSIGLD DAANRLGVER RRVYDIVNIL ESVGVLSRKT  120
KNQYFWKGFS AIPRALDELK EKALRENFCT SGVFHSANVS SVNHCGGPSN SKTDRKDKPS  180
VSNKVDNRKE ISLGLLTMNF VKLFICSHLS YIYDLISLDN AATALLGDIH DPTTMRTKVR  240
RLYDIANVSL KRLSTQRAGN WHLDDHKHTL SKKSKSESSI DCNSNEKADM PMLMKHNNSK  300
DKHDRSSLEQ QGRYSSKGSV FGPFTPASVP KVGDSGNKNE RRVNLASYRP QYHNQALSDL  360
FAHYVAAWKS WNVEVDEKKQ TQQVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	7e-79	E2F/DP family protein