PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065735.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 235aa    MW: 26830.8 Da    PI: 10.0535
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.6e-17124168248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      gr ++eE+ ++++++kq+G++ W++Iar+++ gRt++++k++w+++l
   XP_028065735.1 124 GRLSAEEERIILQLHKQWGNK-WSKIARRLP-GRTDNEIKNYWRSHL 168
                      7889*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MQREEAATAK VIQKEVAKKK QTTEFYALHS SLIITITTSE AAAAVILPST LASSASKGIR  60
KSHTEVPMNI VIMCWAELVE NEVKVRDWTE VDSELLSVRA GLRRSGKSCR MRWMNYLRPN  120
LKHGRLSAEE ERIILQLHKQ WGNKWSKIAR RLPGRTDNEI KNYWRSHLRK NAQVREQVNY  180
ALGALYYLCN GSNKEEILKP EVVDVIRRYA AAGAVSVSFS NLAQAFLDKH VDEHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.11e-39MYB family protein