PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065806.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 464aa MW: 53136.9 Da PI: 6.6914

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.6	1.8e-17	75	168	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn YAk GFs+rk + +++ ++g++++r + Cs+eg+r + + +ek+r ++a tr+g ka+++++ ++ gk++vt+++ +HnHela XP_028065806.1 75 FYNVYAKAKGFSIRKFRFNTN-KEGKVVCRLWLCSREGQRLPIYLDrvAEKSRAPKALTRVGFKAQFRIRYDTdaseGGKYVVTHFVADHNHELA 168 9**************9998.6666999*******99877766899999***********9987666789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MCSMARAEVK REGDDCDIPN EADDIRLMSE SRVEPYHGCE AGPSNEEATN MNVEAGGADV 60 KKEMKFDSVE DGEAFYNVYA KAKGFSIRKF RFNTNKEGKV VCRLWLCSRE GQRLPIYLDR 120 VAEKSRAPKA LTRVGFKAQF RIRYDTDASE GGKYVVTHFV ADHNHELAEQ HCVMYLRSHR 180 SLNSADKAQA MAMRNVGVRT SQIMDYMVNQ SGSYENVGFV RTNLHNHIQA ERRAQVEDGD 240 AQDSKSQADY AKFGDVLIFD STYRTNAYKK PFVMSAGVTS HFRTTIFACV LLANETIETY 300 TWILETFMEA MGNEAPVSVL TDGDKAMREA IRRVFPDARH RLCNWHLGKN AVSNVHISGF 360 AHAFKQCMDM ETDETNWLLE TYEKRHMWAE AYMHGHFFAG MKSTQCSECM NAYFNPFLQH 420 KLKLYEFVRH YDRALARIRY NEAGDDAETN NTFLVLIAPL RDIE

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MCSMARAEVK REGDDCDIPN EADDIRLMSE SRVEPYHGCE AGPSNEEATN MNVEAGGADV  60
KKEMKFDSVE DGEAFYNVYA KAKGFSIRKF RFNTNKEGKV VCRLWLCSRE GQRLPIYLDR  120
VAEKSRAPKA LTRVGFKAQF RIRYDTDASE GGKYVVTHFV ADHNHELAEQ HCVMYLRSHR  180
SLNSADKAQA MAMRNVGVRT SQIMDYMVNQ SGSYENVGFV RTNLHNHIQA ERRAQVEDGD  240
AQDSKSQADY AKFGDVLIFD STYRTNAYKK PFVMSAGVTS HFRTTIFACV LLANETIETY  300
TWILETFMEA MGNEAPVSVL TDGDKAMREA IRRVFPDARH RLCNWHLGKN AVSNVHISGF  360
AHAFKQCMDM ETDETNWLLE TYEKRHMWAE AYMHGHFFAG MKSTQCSECM NAYFNPFLQH  420
KLKLYEFVRH YDRALARIRY NEAGDDAETN NTFLVLIAPL RDIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-66	FAR1 family protein