PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065807.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 205aa MW: 23177.2 Da PI: 9.8977

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.5	4.1e-22	90	149	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+++t++ql++Lee++e r+psa++++++A+kl +++ ++V++WFqN++a+e++ XP_028065807.1 90 ARWNPTPDQLRALEEMYEGgIRTPSADQIQQIAAKLrqygKIEGKNVFYWFQNHKARERQ 149 7***************99************************************97 PP
2	Wus_type_Homeobox	116.1	1.7e-37	89	151	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Ptp+Q++ Lee+y+ G+rtP++++iq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_028065807.1 89 SARWNPTPDQLRALEEMYEGGIRTPSADQIQQIAAKLRQYGKIEGKNVFYWFQNHKARERQKR 151 68***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MWMMGCSSDC CSSKFNFNFN RSESDSINSR KLRPLIPKPT TNTTFSAMPN PSSYCTCLHK 60 TNLFSLNDQM ATMKEQSKAD INTTVALVSA RWNPTPDQLR ALEEMYEGGI RTPSADQIQQ 120 IAAKLRQYGK IEGKNVFYWF QNHKARERQK RRRILDSLSQ GLSKTGFEVA HAKNKATSSN 180 SSTLSEHKFN SLVTDPLLPT ESQPI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	154	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	6e-43	WOX family protein