PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065859.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SRS

Protein Properties

Length: 188aa MW: 21178.7 Da PI: 8.7973

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	168	4.9e-52	10	144	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaesk 97 +++CqdCGnqakk+Ca++RCRtCCk+rgf+C+thvkstWvp+++r +r qq+ + +++++++ +++++kr +++++ XP_028065859.1 10 DSSRCQDCGNQAKKGCAYMRCRTCCKTRGFQCQTHVKSTWVPVSRRHSRLQQQFPTVHQQQHQHlQAQNPKRC-----------------RQNPP 87 5789*******************************************777766544443322133333333.................34577 PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + le+ ++P+e++ + frcvrvss d++ +++aYqt ++igGh+fkGiLydqG+e+ XP_028065859.1 88 TGLEVGNFPAELHIPTTFRCVRVSSHDNAVDQYAYQTEINIGGHLFKGILYDQGPEA 144 7899999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MMMRQGGGSD SSRCQDCGNQ AKKGCAYMRC RTCCKTRGFQ CQTHVKSTWV PVSRRHSRLQ 60 QQFPTVHQQQ HQHLQAQNPK RCRQNPPTGL EVGNFPAELH IPTTFRCVRV SSHDNAVDQY 120 AYQTEINIGG HLFKGILYDQ GPEAETHYTA DESASVQQQP NLITTGLTSS SYPSPFIPGT 180 QYFPYPKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	9e-48	SRS family protein