PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065876.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 216aa MW: 24767.2 Da PI: 9.8549

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.1	2.4e-12	49	135	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +Y k++ F + ++++ ++ge++ C++ kr+++++ + +++ +++++Ck +++ +++kdg++++t ++l+H+H+l p XP_028065876.1 49 FYAKYEKHLRFAIAYRTQNIG-DDGEVKYFGIECTRARKRTKRSEV--NPLKPSLSSKIECKVRVRASLQKDGRYRLTIVVLKHTHDLIP 135 9**********99988776.9999***********99877..9999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MDIDSNNTSF NGIEEVEEPE NNLSLNESGE VEGSKKGMYF ISKQEVYAFY AKYEKHLRFA 60 IAYRTQNIGD DGEVKYFGIE CTRARKRTKR SEVNPLKPSL SSKIECKVRV RASLQKDGRY 120 RLTIVVLKHT HDLIPSNSRH FAMNKRILTP VKRRLEINDA VGIGVAKNFH SIVVKAGRYE 180 ALIFDERDAR NHIENARKLT RGVGDAESIA LYFHNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-11	FAR1 family protein