PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028065944.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 772aa MW: 88780.6 Da PI: 8.3682

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028065944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.1	2.2e-21	52	126	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn YA ++GF++r+ + ++s+ +g++++r+fvCskeg++++ +rtgC a ++v+k+++gkw+++++++eHnHel XP_028065944.1 52 EFYNLYAAQAGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKSDSGKWVLANIKKEHNHEL 126 6*************************************987..............589*************************98 PP
2	FAR1	68.4	1.8e-21	205	280	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY++YA ++GF+vr+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++++g+w+v++l++eHnH+l XP_028065944.1 205 KFYHAYAASTGFKVRIGQLFRSKHDGSITSRRFVCSKEGRQHP--------------SRVGCSAFMRIQRQESGRWVVDRLQKEHNHDLD 280 6************************************9988..............4899************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MQREELRNIM TVRAKPVGAL LLKNNGRRED EGESKLEPHV GLEFDSAEDA QEFYNLYAAQ 60 AGFKIRIGQL YRSRVDGSVI SRRFVCSKEG FQTNSRTGCP AFIRVQKSDS GKWVLANIKK 120 EHNHELGLPG EIRPPHIQRK AHPAPRSSVV VSTRTGIRSL EEEDGRPSPS EAMDVKRFKR 180 EEVEGVPKVE PYKGLEFSSA NEAYKFYHAY AASTGFKVRI GQLFRSKHDG SITSRRFVCS 240 KEGRQHPSRV GCSAFMRIQR QESGRWVVDR LQKEHNHDLD SPMDASRLIA TGPKGFKEEV 300 SCGLENLDLV ETNGGLNLVK RGRQCNIGSD WYPVLLDYFQ SRQAEDTGFF YAVEVDDGKS 360 MSIFWADGRS RFSCSQFGDA IVFDTAYRSS SYLVPYASFI GINHHRQPVL LGCALIADES 420 EESFTWVFQT WLRAMSGRRP LSIIADQDKA IQHSIAQVFP GTHHRFSTWQ IKAKEQRYLG 480 SLLSMDTEFK YEYETCICQS QTPNEFDSAW NVLLNKFDLK ENAWLKEMYR MRKSWVPLYI 540 RGTFFAGIPM DGSMKSFFGT FLNAQTPLNE FVIRYEKALE QRREEERKED FNSFNMQAVL 600 HTKDPIEEQG RRLYTITMFK AFQKEVLECY SYVGIKINVE GAISRYMVQN CGDGDERNTV 660 AFNASNLNVS CSCKMFEFEG MLCRHALKVF QIMNIRELPS RYILHRWTKN AKYGILRDVD 720 SGGGSQDFRA LMLWSLREEA CNYIEAGTTS LERYKLAFEI MQEGRRNLCW QN

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MQREELRNIM TVRAKPVGAL LLKNNGRRED EGESKLEPHV GLEFDSAEDA QEFYNLYAAQ  60
AGFKIRIGQL YRSRVDGSVI SRRFVCSKEG FQTNSRTGCP AFIRVQKSDS GKWVLANIKK  120
EHNHELGLPG EIRPPHIQRK AHPAPRSSVV VSTRTGIRSL EEEDGRPSPS EAMDVKRFKR  180
EEVEGVPKVE PYKGLEFSSA NEAYKFYHAY AASTGFKVRI GQLFRSKHDG SITSRRFVCS  240
KEGRQHPSRV GCSAFMRIQR QESGRWVVDR LQKEHNHDLD SPMDASRLIA TGPKGFKEEV  300
SCGLENLDLV ETNGGLNLVK RGRQCNIGSD WYPVLLDYFQ SRQAEDTGFF YAVEVDDGKS  360
MSIFWADGRS RFSCSQFGDA IVFDTAYRSS SYLVPYASFI GINHHRQPVL LGCALIADES  420
EESFTWVFQT WLRAMSGRRP LSIIADQDKA IQHSIAQVFP GTHHRFSTWQ IKAKEQRYLG  480
SLLSMDTEFK YEYETCICQS QTPNEFDSAW NVLLNKFDLK ENAWLKEMYR MRKSWVPLYI  540
RGTFFAGIPM DGSMKSFFGT FLNAQTPLNE FVIRYEKALE QRREEERKED FNSFNMQAVL  600
HTKDPIEEQG RRLYTITMFK AFQKEVLECY SYVGIKINVE GAISRYMVQN CGDGDERNTV  660
AFNASNLNVS CSCKMFEFEG MLCRHALKVF QIMNIRELPS RYILHRWTKN AKYGILRDVD  720
SGGGSQDFRA LMLWSLREEA CNYIEAGTTS LERYKLAFEI MQEGRRNLCW QN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein