PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028065946.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 768aa    MW: 88253 Da    PI: 8.4492
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028065946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.12.2e-2148122189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fYn YA ++GF++r+ + ++s+ +g++++r+fvCskeg++++              +rtgC a ++v+k+++gkw+++++++eHnHel
  XP_028065946.1  48 EFYNLYAAQAGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKSDSGKWVLANIKKEHNHEL 122
                     6***************************************987..............589***************************98 PP
2FAR168.41.8e-21201276190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY++YA ++GF+vr+ +  +sk++g+it+r+fvCskeg++++              +r+gC a ++++++++g+w+v++l++eHnH+l 
  XP_028065946.1 201 KFYHAYAASTGFKVRIGQLFRSKHDGSITSRRFVCSKEGRQHP--------------SRVGCSAFMRIQRQESGRWVVDRLQKEHNHDLD 276
                     6**************************************9988..............4899**************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MQRNIMTVRA KPVGALLLKN NGRREDEGES KLEPHVGLEF DSAEDAQEFY NLYAAQAGFK  60
IRIGQLYRSR VDGSVISRRF VCSKEGFQTN SRTGCPAFIR VQKSDSGKWV LANIKKEHNH  120
ELGLPGEIRP PHIQRKAHPA PRSSVVVSTR TGIRSLEEED GRPSPSEAMD VKRFKREEVE  180
GVPKVEPYKG LEFSSANEAY KFYHAYAAST GFKVRIGQLF RSKHDGSITS RRFVCSKEGR  240
QHPSRVGCSA FMRIQRQESG RWVVDRLQKE HNHDLDSPMD ASRLIATGPK GFKEEVSCGL  300
ENLDLVETNG GLNLVKRGRQ CNIGSDWYPV LLDYFQSRQA EDTGFFYAVE VDDGKSMSIF  360
WADGRSRFSC SQFGDAIVFD TAYRSSSYLV PYASFIGINH HRQPVLLGCA LIADESEESF  420
TWVFQTWLRA MSGRRPLSII ADQDKAIQHS IAQVFPGTHH RFSTWQIKAK EQRYLGSLLS  480
MDTEFKYEYE TCICQSQTPN EFDSAWNVLL NKFDLKENAW LKEMYRMRKS WVPLYIRGTF  540
FAGIPMDGSM KSFFGTFLNA QTPLNEFVIR YEKALEQRRE EERKEDFNSF NMQAVLHTKD  600
PIEEQGRRLY TITMFKAFQK EVLECYSYVG IKINVEGAIS RYMVQNCGDG DERNTVAFNA  660
SNLNVSCSCK MFEFEGMLCR HALKVFQIMN IRELPSRYIL HRWTKNAKYG ILRDVDSGGG  720
SQDFRALMLW SLREEACNYI EAGTTSLERY KLAFEIMQEG RRNLCWQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1 family protein