PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066261.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 365aa MW: 40561 Da PI: 4.6136

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.8	9.1e-14	194	237	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er+RR+r+N+++ L l+P++ kK++Ka+iLe A+eYIk+L+ XP_028066261.1 194 LAERKRRERLNQKLICLSALIPSL-----KKMDKASILEDAIEYIKQLK 237 68********************.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MDTPSWALVR ERSLVTCTHG VALGASSTLM DVMSSDWLHG LEMEEDPNLM LQCQMDSVDH 60 LLDEITFKCF SPEAYSFYAS LNNGSAHIET DILELAGEIK SNANNDNFDN NENVVLFGQS 120 GSPSTHSESF NGGDLRDAGT PKDDEMASQD YMNLLAMSSP SSEENIHDTL GASKRVKKVC 180 ATSRAPLQAE NRILAERKRR ERLNQKLICL SALIPSLKKM DKASILEDAI EYIKQLKEHV 240 QTLEKEAKEK MVEPTALPVK NKCGPPSAID DDDDENLSKK LSAQIDVKVS DNNVLVRIYC 300 EKSNFVTPKL LTQIQGLHLN IITSIVLPFG NTSLVITIIA QMENEFYLTG MDVEKNLRSA 360 IQNFM

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MDTPSWALVR ERSLVTCTHG VALGASSTLM DVMSSDWLHG LEMEEDPNLM LQCQMDSVDH  60
LLDEITFKCF SPEAYSFYAS LNNGSAHIET DILELAGEIK SNANNDNFDN NENVVLFGQS  120
GSPSTHSESF NGGDLRDAGT PKDDEMASQD YMNLLAMSSP SSEENIHDTL GASKRVKKVC  180
ATSRAPLQAE NRILAERKRR ERLNQKLICL SALIPSLKKM DKASILEDAI EYIKQLKEHV  240
QTLEKEAKEK MVEPTALPVK NKCGPPSAID DDDDENLSKK LSAQIDVKVS DNNVLVRIYC  300
EKSNFVTPKL LTQIQGLHLN IITSIVLPFG NTSLVITIIA QMENEFYLTG MDVEKNLRSA  360
IQNFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	201	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	4e-43	bHLH family protein