PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066262.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 336aa MW: 37519.5 Da PI: 4.5467

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43	8.1e-14	165	208	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er+RR+r+N+++ L l+P++ kK++Ka+iLe A+eYIk+L+ XP_028066262.1 165 LAERKRRERLNQKLICLSALIPSL-----KKMDKASILEDAIEYIKQLK 208 68********************.....9***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MDVMSSDWLH GLEMEEDPNL MLQCQMDSVD HLLDEITFKC FSPEAYSFYA SLNNGSAHIE 60 TDILELAGEI KSNANNDNFD NNENVVLFGQ SGSPSTHSES FNGGDLRDAG TPKDDEMASQ 120 DYMNLLAMSS PSSEENIHDT LGASKRVKKV CATSRAPLQA ENRILAERKR RERLNQKLIC 180 LSALIPSLKK MDKASILEDA IEYIKQLKEH VQTLEKEAKE KMVEPTALPV KNKCGPPSAI 240 DDDDDENLSK KLSAQIDVKV SDNNVLVRIY CEKSNFVTPK LLTQIQGLHL NIITSIVLPF 300 GNTSLVITII AQMENEFYLT GMDVEKNLRS AIQNFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	172	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	1e-43	bHLH family protein