PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066339.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 273aa    MW: 31874.7 Da    PI: 5.6359
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++ Ed +l  +++++G  +W+  +++ g+ R++k+c++rw +yl
   XP_028066339.1 14 KGEWSPVEDNKLRAYIHRYGHWNWRELPKYAGLSRCGKSCRLRWMNYL 61
                     799*****************99************************97 PP
2Myb_DNA-binding55.41.4e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+ Ed+l+ +++++lG++ W++Ia++++ gRt++++k++w+++l
   XP_028066339.1  67 RGKYTKAEDDLIMELHEKLGNK-WSAIAAKLP-GRTDNEIKNHWHTHL 112
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVRTPSFDKN GMKKGEWSPV EDNKLRAYIH RYGHWNWREL PKYAGLSRCG KSCRLRWMNY  60
LRPNVKRGKY TKAEDDLIME LHEKLGNKWS AIAAKLPGRT DNEIKNHWHT HLKKRIKENQ  120
STFELKQKAI QISQSLANLE LQSHESPRSE INQVTDELGS KDVTDEIYQQ ILESSPLSSR  180
ELSSSDFSSS MTSDYALLSD KNWVGEDIMS SLELFEESVR NFWIEPVFEE FSYQQNGFSS  240
TLAEGESMCP CFLDHDDDSI EWFHQILKEL PEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.13e-57MYB family protein