PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066362.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 206aa MW: 22319.3 Da PI: 8.1124

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.1	4.5e-36	35	113	6	83
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas 83 ++ +++hTkv+gR+RR+R++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++++a+ + ++ s s++ XP_028066362.1 35 SSLKDRHTKVNGRGRRIRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTTPAEPFsTPTSTIPSSQ 113 6679********************************************************9999866644444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MSSEMLHRNF SSQNHISTTA AAAELVPTRK GGGSSSLKDR HTKVNGRGRR IRMPALCAAR 60 IFQLTRELGH RSDGETIEWL LRQAEPSIIA ATGTGTTPAE PFSTPTSTIP SSQRSVFASL 120 SPSYSRVPAP ATPLTASMSG SRHIIMPGML VAPPSCRVDL CRAASPAMGM EFTGDEFYRN 180 MPFTALLMQP ESDEAEERHN EEIFGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	6e-29	TCP family protein