PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066441.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 210aa MW: 23120.8 Da PI: 8.6325

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	185.3	4.5e-58	25	122	1	98
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian+srimkk+lPan+k++kdaketvqecvsefisfvtseasdkcqrekrktingddllwa+atlGfedy++plk+yl++yre+eg XP_028066441.1 25 VREQDRYLPIANISRIMKKALPANGKVAKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKKYLTRYREMEG 119 69********************************************************************************************* PP NF-YB 96 ekk 98 ++k XP_028066441.1 120 DTK 122 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MADGALGSPG GGSHESGEQS PRSNVREQDR YLPIANISRI MKKALPANGK VAKDAKETVQ 60 ECVSEFISFV TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIDPLKKY LTRYREMEGD 120 TKGSGKGGEG SGRKDGVHPG PNAQLAYQGS FSQGINYGNS QADLQQRPHF WGNDSKMSPY 180 LMVGKKQKEK DEKGNKSQAQ HMMVHMQGTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	1e-64	NF-YB family protein