PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066443.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 175aa    MW: 19019.1 Da    PI: 6.9463
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1862.8e-5825122198
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+k++kdaketvqecvsefisfvtseasdkcqrekrktingddllwa+atlGfedy++plk+yl++yre+eg
  XP_028066443.1  25 VREQDRYLPIANISRIMKKALPANGKVAKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKKYLTRYREMEG 119
                     69********************************************************************************************* PP

           NF-YB  96 ekk 98 
                     ++k
  XP_028066443.1 120 DTK 122
                     975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MADGALGSPG GGSHESGEQS PRSNVREQDR YLPIANISRI MKKALPANGK VAKDAKETVQ  60
ECVSEFISFV TSEASDKCQR EKRKTINGDD LLWAMATLGF EDYIDPLKKY LTRYREMEGD  120
TKGSGKGGEG SGRKDGVHPG PNAQLAYQGS FSQGINYGNS QSQAQHMMVH MQGTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.13e-69NF-YB family protein