PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066463.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 153aa    MW: 17108.7 Da    PI: 10.0155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.7e-09103150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      rW+t E++ l  +v+++G g+Wk+I +      + R + ++k++w++ 
   XP_028066463.1 103 RWSTLEEDTLRTGVQKFGRGNWKLILNSDRyifEERIEVDLKDKWRNM 150
                      9*************************999999999**********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MAPYLPQSGA GGGGSPYSEG GALYALGLIH ANHGEGIKQF LCDSLCSTNG EVIQHGACLG  60
LGFPEESGDS RSGLHLSTPK RMVVSPLKKH KIKKLARRRK IKRWSTLEED TLRTGVQKFG  120
RGNWKLILNS DRYIFEERIE VDLKDKWRNM IHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187103LKKHKIKKLARRRKIKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.16e-12MYB_related family protein