PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066522.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 172aa    MW: 19109.3 Da    PI: 6.8853
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.8e-052749123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ F+++  L  H++ H
  XP_028066522.1 27 FECQYCDRGFPNSQALGGHQNAH 49
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MKLFGVPVTD CDEVPVTVPQ DGDNKRFECQ YCDRGFPNSQ ALGGHQNAHK KERQRAKRAQ  60
FESDHHQYPR FRMAVPVHNH HAARSGPLIH SSGSPSLSSN TNVACCCSSS FRSACECCVY  120
PPQVMAEFPP RSPPHWFHAG EPRQVALVGS DDDVVPSKSL MDDDKVDVDL HL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.14e-15C2H2 family protein