PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066524.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 288aa    MW: 33008.3 Da    PI: 6.7171
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.32.2e-1736123191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY +YAk+vGF +  +++    ++ge       Cs++gkr ++++   +  +++ +t+++Cka+++ +++kdg++++t+++l+HnH+l p
  XP_028066524.1  36 SFYAKYAKHVGFFIAYKTQACG-DDGELRYFGIECSRSGKRIKKSEV--NPLKPSLSTKIDCKARVQATLQKDGRFMLTTVKLDHNHDLIP 123
                     5*************99987776.9999**************998766..999************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEIGSNSAEN PLLNESEEVE EPKRGMCFSS KQEMYSFYAK YAKHVGFFIA YKTQACGDDG  60
ELRYFGIECS RSGKRIKKSE VNPLKPSLST KIDCKARVQA TLQKDGRFML TTVKLDHNHD  120
LIPTESRHFT MNKKILTPVK RRLEINDQAG IGVSRNYHSM VVEAGGYESL TFDERDARNY  180
IDRARKLRLG EGDSDALQKY FLRMHAQNSS FYYMIDVDTD FRIRNLFWED AMSQATYKEF  240
GDVVSFDTTY LTNKYDMPFA LFVGVNHHGQ SILLGCGLLS SEDTDTFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.16e-53FAR1 family protein