PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066526.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 328aa    MW: 36953.5 Da    PI: 5.3472
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.3e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEd+ l+++++  G  +W++ ++  g+ R++k+c++rw +yl
   XP_028066526.1 14 KGRWTAEEDQTLIKYIQSNGEVSWRALPKNAGLLRCGKSCRLRWVNYL 61
                     79******************99**********99************97 PP
2Myb_DNA-binding53.65e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE+  +v++++ lG++ W++Ia++++ gRt++++k++w+++l
   XP_028066526.1  67 RGNITAEEETTIVNLHASLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MGRAPCCEKV GLRKGRWTAE EDQTLIKYIQ SNGEVSWRAL PKNAGLLRCG KSCRLRWVNY  60
LRGNLKRGNI TAEEETTIVN LHASLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYYKI  120
PNDGESVPTS SIPTAKMAAT FTPSQRGRVS RSDAKKYKKK VPSAANVGLA EERERMNLDE  180
QTVERGGQVG GVLLHGSCMD SEVMCLGDQV TNSSEEKEKV VVLGPYKELE NDMVHNNIIM  240
EARVDEEREN RVLGENVNGF EEIKCGFLCS NSEFGEWYSY PSPTMNSCFD SDQWVGCNWD  300
SCDEGLKLGD EEEDSFWLWD SSMIASAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.11e-72MYB family protein