PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066529.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 827aa MW: 95968.2 Da PI: 8.592

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.6	4.7e-14	56	141	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY eYAk+ GF + ++++ + +ge++ +C++ +r+++++ + +++ +++ +Cka+++ +++ dg++++t+++leH+H+l+ XP_028066529.1 56 FYAEYAKHSGFAIAYRSQNLT-CDGEVKYFGIKCTRARNRTKRSEI--NPLEPSLSSKNECKARVRASLQMDGTYKLTTVVLEHTHDLV 141 9**********99998887.8999***********99988..8999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MDIDSNNNFF NGSDEVEEKD NSLSFNECED DEVKEEEVEE PKKGMYFSSK EEVYAFYAEY 60 AKHSGFAIAY RSQNLTCDGE VKYFGIKCTR ARNRTKRSEI NPLEPSLSSK NECKARVRAS 120 LQMDGTYKLT TVVLEHTHDL VATDSRHFAV NKRIVTPVKR RLEVNDAAGI GVAKNFHSIV 180 VEAGGYEALT FDERDARNYI NNARMLRLGV GDAESVTHYF HKMQQQNSNF YSAIDFDENG 240 RMRNLFWADA RSRAAYKAFG DFVSFDTTYL TNKYDMPFAP FVGVNYHGQS ILFGCGLLSN 300 ENTETFVWLF KEWLSCMSDA PPKAIITDQC RSMQNAIEIV FLEARHRWCL WHIMKKIPEK 360 LRGYSQYESI KVAFSNAVYD SFTIDEFEEY WEAMIENFNL NDNEWLGVLH RERHGWIPAY 420 VKDIFWAGMS TTQRSESMNA FFVGYVNSKT TLKQFVEQYD NALRSKVEKE TKADFKSRNK 480 LYDCLTVYRF EKQFRAAYTN SKFKEVQVEL KRLVYCRANL IKQEGAVCTY HVREAIVVGE 540 GTKKVKFVVY FNSTKCEPRC MCRLFEFRGI MCAHSLSVLI ERSIYEVPTR YIVSRWRKDL 600 ERGYTCIPTT YTNFGSSLHP KLHDNYHNTL DEILDLATND DAKHKVIQLG LMKIKDEVRT 660 VQSSSASNVP CTSTLPPSNS TLPPSHTSPK GPPRINSTKE SMTRNVRSPL VARRRGRPCT 720 KRKVSKVDAI VNWLKEKNKK VRQGEPRKLS FPCMGVVQHT MYEPVPPSQH YYRPFMNAIA 780 DPFLVPICVQ RTQYIPLCLW NFVFIIYFIF TGTSYHKWGR HWEHIFC

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MDIDSNNNFF NGSDEVEEKD NSLSFNECED DEVKEEEVEE PKKGMYFSSK EEVYAFYAEY  60
AKHSGFAIAY RSQNLTCDGE VKYFGIKCTR ARNRTKRSEI NPLEPSLSSK NECKARVRAS  120
LQMDGTYKLT TVVLEHTHDL VATDSRHFAV NKRIVTPVKR RLEVNDAAGI GVAKNFHSIV  180
VEAGGYEALT FDERDARNYI NNARMLRLGV GDAESVTHYF HKMQQQNSNF YSAIDFDENG  240
RMRNLFWADA RSRAAYKAFG DFVSFDTTYL TNKYDMPFAP FVGVNYHGQS ILFGCGLLSN  300
ENTETFVWLF KEWLSCMSDA PPKAIITDQC RSMQNAIEIV FLEARHRWCL WHIMKKIPEK  360
LRGYSQYESI KVAFSNAVYD SFTIDEFEEY WEAMIENFNL NDNEWLGVLH RERHGWIPAY  420
VKDIFWAGMS TTQRSESMNA FFVGYVNSKT TLKQFVEQYD NALRSKVEKE TKADFKSRNK  480
LYDCLTVYRF EKQFRAAYTN SKFKEVQVEL KRLVYCRANL IKQEGAVCTY HVREAIVVGE  540
GTKKVKFVVY FNSTKCEPRC MCRLFEFRGI MCAHSLSVLI ERSIYEVPTR YIVSRWRKDL  600
ERGYTCIPTT YTNFGSSLHP KLHDNYHNTL DEILDLATND DAKHKVIQLG LMKIKDEVRT  660
VQSSSASNVP CTSTLPPSNS TLPPSHTSPK GPPRINSTKE SMTRNVRSPL VARRRGRPCT  720
KRKVSKVDAI VNWLKEKNKK VRQGEPRKLS FPCMGVVQHT MYEPVPPSQH YYRPFMNAIA  780
DPFLVPICVQ RTQYIPLCLW NFVFIIYFIF TGTSYHKWGR HWEHIFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	97	RNRTKR
2	717	727	RPCTKRKVSKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-120	FAR1 family protein