PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028066605.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 641aa MW: 71596.4 Da PI: 4.7956

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028066605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.7	5.2e-05	551	611	1	54
TT--SS--HHHHHHHHHHHHHSSS--H..HHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsa..eereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+ + e++ ++ +++ ++ + A+kl ++t++q k+W Nr+a+ XP_028066605.1 551 KRKRTIMNDEQIAVIERALLDEPDMQRnfTSVQSWADKLslhgsEVTTSQLKNWLNNRKAR 611 79****************988887733699***9999999************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MPLLHSALVA CSLYLLTGCI SSQWQELALV LVSHSQVDVF MDTAFAALRL DIKFLHIKLS 60 GQCTEGTLNY LSQQCEASLQ FLQSLCQQKL FRERLVKNKE LCGKGGVLLL ARAILNLEVT 120 PLFKESFSVV AAISRLKSKI LSILLHLCEA ESISFLDEVA RTPQSMDLAK SVALEVLELL 180 KTMIVRDPKQ LACSDKNYPT GLLQLNAMRL ADIFSDDSNF RSYIMIYYTE VLTAIFALPH 240 QEFLSNWCSS DLPTREEDAT LEYDLFAAAG CVLDSSSSSD LPNVMNSGPN FIPINIPWAS 300 YAHQRSSLLV KIIANLHCFV PEICKEEKDV FLDKFLECLQ REQPISPASD AEKAVTVSSN 360 LCSLLSHAES LTPSFLNKED VHLLRVFFMQ LESLITSAEF ENRVQENKFE GSECGDKLSK 420 LNISEHFQEN QKSAGGCSSP LLDNIGPDHT NRIGNLKEGM SEKFDFQEED QLYVRSSCID 480 QTGDMMLQDK EEDKSKYGTE AGGFREIQNV ETSGSDSSST REKNSKESGI GGVLEDEKVE 540 DVQCEEKQQR KRKRTIMNDE QIAVIERALL DEPDMQRNFT SVQSWADKLS LHGSEVTTSQ 600 LKNWLNNRKA RLTRAAKDGR APSVGDNVFP DKQGVSGIVS L

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MPLLHSALVA CSLYLLTGCI SSQWQELALV LVSHSQVDVF MDTAFAALRL DIKFLHIKLS  60
GQCTEGTLNY LSQQCEASLQ FLQSLCQQKL FRERLVKNKE LCGKGGVLLL ARAILNLEVT  120
PLFKESFSVV AAISRLKSKI LSILLHLCEA ESISFLDEVA RTPQSMDLAK SVALEVLELL  180
KTMIVRDPKQ LACSDKNYPT GLLQLNAMRL ADIFSDDSNF RSYIMIYYTE VLTAIFALPH  240
QEFLSNWCSS DLPTREEDAT LEYDLFAAAG CVLDSSSSSD LPNVMNSGPN FIPINIPWAS  300
YAHQRSSLLV KIIANLHCFV PEICKEEKDV FLDKFLECLQ REQPISPASD AEKAVTVSSN  360
LCSLLSHAES LTPSFLNKED VHLLRVFFMQ LESLITSAEF ENRVQENKFE GSECGDKLSK  420
LNISEHFQEN QKSAGGCSSP LLDNIGPDHT NRIGNLKEGM SEKFDFQEED QLYVRSSCID  480
QTGDMMLQDK EEDKSKYGTE AGGFREIQNV ETSGSDSSST REKNSKESGI GGVLEDEKVE  540
DVQCEEKQQR KRKRTIMNDE QIAVIERALL DEPDMQRNFT SVQSWADKLS LHGSEVTTSQ  600
LKNWLNNRKA RLTRAAKDGR APSVGDNVFP DKQGVSGIVS L