PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066607.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-other
Protein Properties Length: 253aa    MW: 28318.2 Da    PI: 4.5966
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox16.71.2e-05163223154
                     TT--SS--HHHHHHHHHHHHHSSS--H..HHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsa..eereeLAkkl.....gLterqVkvWFqNrRak 54 
                     +rkRt +++eq+ + e++   ++ +++  ++ +  A+kl     ++t++q k+W  Nr+a+
  XP_028066607.1 163 KRKRTIMNDEQIAVIERALLDEPDMQRnfTSVQSWADKLslhgsEVTTSQLKNWLNNRKAR 223
                     79******************988887733699*******9999999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MQLESLITSA EFENRVQENK FEGSECGDKL SKLNISEHFQ ENQKSAGGCS SPLLDNIGPD  60
HTNRIGNLKE GMSEKFDFQE EDQLYVRSSC IDQTGDMMLQ DKEEDKSKYG TEAGGFREIQ  120
NVETSGSDSS STREKNSKES GIGGVLEDEK VEDVQCEEKQ QRKRKRTIMN DEQIAVIERA  180
LLDEPDMQRN FTSVQSWADK LSLHGSEVTT SQLKNWLNNR KARLTRAAKD GRAPSVGDNV  240
FPDKQGVSGI VSL