PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066653.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 213aa    MW: 24893.4 Da    PI: 8.1803
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.72.1e-13990186
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                    f+kvl++sd++k+  l +p + +   ++++e++  ++++d++gr+W++++ ++   ++  l++ W++F ka gL  g +v F+++ 
  XP_028066653.1  9 FEKVLSKSDATKTI-LQVPHSAT---NLPEENKEVIVVKDQTGRKWKFEVAIKDDEKQKRLQGEWSQFTKAYGLMKGVIVKFYFNP 90
                    89***999999996.88888876...4555666789**************9977777889**********************9754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSSSVFFCFE KVLSKSDATK TILQVPHSAT NLPEENKEVI VVKDQTGRKW KFEVAIKDDE  60
KQKRLQGEWS QFTKAYGLMK GVIVKFYFNP NENLYYVELE GQLLSGWRTT SRISFEKKLS  120
EEDLTDMNIP LIHENNQPVM VVWDQKDMQW RFQIAIGGDN GNKKLLNREK WIQFVRRNEL  180
EAGETLKLRY SPTEGTYSAE CEGPNRIPTR QFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.16e-07B3 family protein