PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066687.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 160aa    MW: 18220.7 Da    PI: 8.4801
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.31.1e-2725114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r++  +k+k n++ ++r +vC+keg+r+ +k++   ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+
  XP_028066687.1  25 DFYNTYGGRMGFSIRRDFCRKNKINNQLICRLLVCNKEGFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDEgTGKYVVTDFKEKHNHDLV 114
                     6*******************************************999.999**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MEPENDCAWK PKQGMTFDSE QCVYDFYNTY GGRMGFSIRR DFCRKNKINN QLICRLLVCN  60
KEGFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDEGTGKY VVTDFKEKHN HDLVSPECAH  120
MLPSQRKIST TQAIELDLAA QSGLRLGQSF ELMGREAGGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-24FAR1 family protein