PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028066798.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 239aa    MW: 26813.5 Da    PI: 9.6381
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028066798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer97.69.6e-312379259
     ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    + vrY eC+kNhAa++Gg+avDGC+Efmp+ geegt+a++kCaAC+CHRnFHR e++e
  XP_028066798.1 23 KMVRYMECRKNHAANIGGYAVDGCREFMPA-GEEGTSAGFKCAACNCHRNFHRMESAE 79
                    679**************************9.999*******************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MKQKKEPKKT SNGGVGGDLL NEKMVRYMEC RKNHAANIGG YAVDGCREFM PAGEEGTSAG  60
FKCAACNCHR NFHRMESAEN DYYSNFLKSQ YSYPNLATLR AVLRYPNRSW AELLNFQPTY  120
RYSGKRKTKV TDFLLQASPE PDPTLPQVRL IPLTAKQEMA KKRAMRALLT ETNLTEVPPA  180
GQTQETVVAL PSQQPSSSRS KKRARTTQTE QRLVDEDKTV VPQTTLPSPP LSPQPECPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.12e-26ZF-HD family protein