PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067209.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NF-YB

Protein Properties

Length: 122aa MW: 13610.6 Da PI: 5.6585

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	81.1	1.4e-25	46	92	2	48
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvts 48 reqdrflPian++rimkk+lPanakiskdake+vqec+sefisf+t+ XP_028067209.1 46 REQDRFLPIANMGRIMKKALPANAKISKDAKEIVQECISEFISFITG 92 89*******************************************97 PP
2	NF-YB	40.3	7.5e-13	90	122	62	94
NF-YB 62 ingddllwalatlGfedyveplkvylkkyrele 94 i+gddl+wa++tlGfe+yveplkvyl +++++e XP_028067209.1 90 ITGDDLFWAMTTLGFEEYVEPLKVYLLRFKDME 122 79****************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence
SKVPHPIPTP KLTHLTPLSP PPPSPPPPES DPSGGHNNSN SELSPREQDR FLPIANMGRI 60 MKKALPANAK ISKDAKEIVQ ECISEFISFI TGDDLFWAMT TLGFEEYVEP LKVYLLRFKD 120 ME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	3e-45	NF-YB family protein