PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067247.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 720aa MW: 83881.3 Da PI: 9.0021

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.7	3.5e-22	54	143	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+YAk vGFs+rk++ + + +++ +r++vCs++g+r++++ + +++r ra tr+ C+a+++++ + gk+ vt+++ eHnH+la XP_028067247.1 54 DFYNQYAKVVGFSIRKDTRTMQ--ATKVLSRKWVCSRQGQRAKQHLArIDRKRAARALTRVCCDAHFRIRYNLdVGKYIVTHFNMEHNHPLA 143 6*************986666..7779**********999885788999*************9989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MDPFGCTKFE RKLEDDEVCG NKEELGSHAN DPIQSLTKND VLEMQFNSEE DANDFYNQYA 60 KVVGFSIRKD TRTMQATKVL SRKWVCSRQG QRAKQHLARI DRKRAARALT RVCCDAHFRI 120 RYNLDVGKYI VTHFNMEHNH PLATSPCVPF LRSHRFVKIP NKAQVKTLHD VGVKTSQIMD 180 LLVQQSRSFA NVGFIHKDLH NYIQAERKVE MKDGDAEFAL AYLCAKANTN PYFFYKYNKD 240 QENRLDKLFW ADSRSRLDYA AFGDVLVFDT TYKTNAYNKP FVIFARVNNH FETTIFACSL 300 LVDETIATYT WVLQKLLEAM DNKRPVSVLT DGDMAMHEAI QKVFPSAKHR LCNWHMHRNA 360 KRNVRVDGFE GHFKHLMELD ANEVVFEEAW SKMVRKYGLQ NNKWVSDTYN NKGMWAQSYS 420 RGHFFAGMKS SQRCEGMHAF FHERLKRKLK LFEFVRCFDM ALYRLRNKEA DAEAKTDNSD 480 PCLATALQPL EKHAATIFTR RLFLMFRNEI IEEALLIFDG RKEEFDHRIY KFSKYTEFGS 540 TWEVSYHPAT SIMKCSCKKF EFFGLPCSHM ISVMKCEHMT EIPPSCVMHR WTKQARKVGE 600 QHCQAQFSST LTQETRFGVL CSFFTEMCYY ASQTYEGFEE ARNAFFTMTC RMKQLCMAKG 660 TNVDEGKSSL PPFGVGDPKV VNTKGNTVGS YMAKPRKPRR CQCCRYTLYC ALCLNFFIVR

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MDPFGCTKFE RKLEDDEVCG NKEELGSHAN DPIQSLTKND VLEMQFNSEE DANDFYNQYA  60
KVVGFSIRKD TRTMQATKVL SRKWVCSRQG QRAKQHLARI DRKRAARALT RVCCDAHFRI  120
RYNLDVGKYI VTHFNMEHNH PLATSPCVPF LRSHRFVKIP NKAQVKTLHD VGVKTSQIMD  180
LLVQQSRSFA NVGFIHKDLH NYIQAERKVE MKDGDAEFAL AYLCAKANTN PYFFYKYNKD  240
QENRLDKLFW ADSRSRLDYA AFGDVLVFDT TYKTNAYNKP FVIFARVNNH FETTIFACSL  300
LVDETIATYT WVLQKLLEAM DNKRPVSVLT DGDMAMHEAI QKVFPSAKHR LCNWHMHRNA  360
KRNVRVDGFE GHFKHLMELD ANEVVFEEAW SKMVRKYGLQ NNKWVSDTYN NKGMWAQSYS  420
RGHFFAGMKS SQRCEGMHAF FHERLKRKLK LFEFVRCFDM ALYRLRNKEA DAEAKTDNSD  480
PCLATALQPL EKHAATIFTR RLFLMFRNEI IEEALLIFDG RKEEFDHRIY KFSKYTEFGS  540
TWEVSYHPAT SIMKCSCKKF EFFGLPCSHM ISVMKCEHMT EIPPSCVMHR WTKQARKVGE  600
QHCQAQFSST LTQETRFGVL CSFFTEMCYY ASQTYEGFEE ARNAFFTMTC RMKQLCMAKG  660
TNVDEGKSSL PPFGVGDPKV VNTKGNTVGS YMAKPRKPRR CQCCRYTLYC ALCLNFFIVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein