PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067254.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 368aa    MW: 40784.1 Da    PI: 9.9932
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.4e-1295139147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_028067254.1  95 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 139
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MIVFLQNSPK NRYFFSLTTK LKKTSQQTHM VSVNQIQPEG FYLDPTGMAL PPLGSFSTAT  60
ATAAASPSTT TTTTTSSSDD LSKKVRKPYT ITKSRESWTE PEHDKFLEAL QLFDRDWKKI  120
EAFIGSKTVI QIRSHAQKYF LKVQKSGTSE HLPPPRPKRK AAHPYPQKAS KNAPVLQEVS  180
ESFQTLPILP EPGFITRPDS SSLLRNPVAG TAVSSWTDNS IQTVSLSHAM KGQPLANNSC  240
SSTESTPRTR PTVEVTDRGN HGPPLRGLIP SLFHAVLPDF AQVYNFIGSV FDPNTTGHLQ  300
KLKKMDPIDV ETVLLLMRNL SINLTSPDFE EHRRLLSSYE IDSEKENSAG ANKNIQDNRS  360
IGAVKYGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-105MYB_related family protein