PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067277.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 452aa MW: 50904.5 Da PI: 4.7786

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.3	1.6e-32	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 lp+G++F+P+d e++++ L+k g+ +e e+i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + XP_028067277.1 58 LPRGVKFDPSDPEIIWHLLAKVSVGNMkphpfIE--EFIPTVNeddgICYTHPQNLP-GVKQDGSVSHFFHRAIKAYSTGTRKRRKIHgddfgDV 149 799**********8877776555556654422..33444433345******.677888899**************8655555588 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 +W++tg++k+v +g ++g+kk++v+y g r k+ekt+Wvmh+y+l XP_028067277.1 150 RWHKTGRTKPVNL-DGVQKGCKKIMVLYMGppRGGKPEKTNWVMHQYHL 197 9********.99********8755677778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MAGPSWLVDS SRIATKIRSA SGLCDPGRVN WKSNPTRACP NCEHIIDNSD VTQEWPGLPR 60 GVKFDPSDPE IIWHLLAKVS VGNMKPHPFI EEFIPTVNED DGICYTHPQN LPGVKQDGSV 120 SHFFHRAIKA YSTGTRKRRK IHGDDFGDVR WHKTGRTKPV NLDGVQKGCK KIMVLYMGPP 180 RGGKPEKTNW VMHQYHLGTG EDEKEGEYVI SKVFYQQQVK QTDKFEQDLP EGIDFMIVKV 240 DPVTPKSVTP EPPRIEWRFS NFDPDPSPQH HEIGLVEDDV QTPCGEPNHQ GSLVTEIHTD 300 QMPDNNDNQT GEDHFVQTPC GEPNHQGSLV TEIHTDQMPV NIDNQTGEDP KWWDGESQYL 360 LDSQQLVEGL SLCDEFLRSQ SPNRDGSENG ESKGKSRLSD YAHLGPEDLK KDLEVCQDLV 420 LDPANIDLDT PPDFRLSQLE FGSQDSFLAW GN

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MAGPSWLVDS SRIATKIRSA SGLCDPGRVN WKSNPTRACP NCEHIIDNSD VTQEWPGLPR  60
GVKFDPSDPE IIWHLLAKVS VGNMKPHPFI EEFIPTVNED DGICYTHPQN LPGVKQDGSV  120
SHFFHRAIKA YSTGTRKRRK IHGDDFGDVR WHKTGRTKPV NLDGVQKGCK KIMVLYMGPP  180
RGGKPEKTNW VMHQYHLGTG EDEKEGEYVI SKVFYQQQVK QTDKFEQDLP EGIDFMIVKV  240
DPVTPKSVTP EPPRIEWRFS NFDPDPSPQH HEIGLVEDDV QTPCGEPNHQ GSLVTEIHTD  300
QMPDNNDNQT GEDHFVQTPC GEPNHQGSLV TEIHTDQMPV NIDNQTGEDP KWWDGESQYL  360
LDSQQLVEGL SLCDEFLRSQ SPNRDGSENG ESKGKSRLSD YAHLGPEDLK KDLEVCQDLV  420
LDPANIDLDT PPDFRLSQLE FGSQDSFLAW GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	0.0	NAC family protein