PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067452.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Dof
Protein Properties Length: 247aa    MW: 27871.1 Da    PI: 4.5884
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.84.1e-373287661
          zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                     +cprC stntkfCyynnys sqPryfCk+CrryWt+GG+lrnvPvGgg+rk +++
  XP_028067452.1 32 PNCPRCASTNTKFCYYNNYSFSQPRYFCKGCRRYWTRGGSLRNVPVGGGCRKTRRA 87
                    58**************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MFAANDQMLQ YPSRPLMIER SWKSCNAAEI APNCPRCAST NTKFCYYNNY SFSQPRYFCK  60
GCRRYWTRGG SLRNVPVGGG CRKTRRAKVV RSLQNQRPTT VTSESDPPPP VALSCRSGGG  120
GSDIDLAEVF AKFLNQNNPT REDDRNQQNQ QLMQDVVVNQ QKEQLSQEFG VGSELGSVGL  180
QTMVSDLELN QGLLQWCDDQ TILPGFEWQP MVDLQEFGSF SSDDDQPEIS ANLISDNWSM  240
FDLSEYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.16e-45Dof family protein