PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067541.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 358aa MW: 40102.6 Da PI: 7.576

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.5e-32	183	236	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_028067541.1 183 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 236 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.8e-15	184	235	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_028067541.1 184 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 235 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MELFPAQPDL SLQISPPNSK PTSGWRRNST STEQDMDFGF LKRALDSSSM AAKPDTGFDL 60 SLSNPMASEP NSNPFHLLQN STSNLIHSFH QNQLFQNHHH QQQQPQQGLM SSELDFLRPI 120 RGIPVYHQNP HHHPYPFSQK PSFDNSYTIA STSTSSPGGF NSQGLIRSRF LSRIPAKRSM 180 RAPRMRWTTT LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT 240 DRAAASSGQS EVYENGSSGD GDTSEDMMFE IQNPRKSEIS IQQGRPNLHE DKDYHGLWSN 300 SSSFFASSRE AWLNGKPRDC GGNIPSLEDM DPKCLNSSNL SETSPKKPNL EFTLGTPQ

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MELFPAQPDL SLQISPPNSK PTSGWRRNST STEQDMDFGF LKRALDSSSM AAKPDTGFDL  60
SLSNPMASEP NSNPFHLLQN STSNLIHSFH QNQLFQNHHH QQQQPQQGLM SSELDFLRPI  120
RGIPVYHQNP HHHPYPFSQK PSFDNSYTIA STSTSSPGGF NSQGLIRSRF LSRIPAKRSM  180
RAPRMRWTTT LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKTT  240
DRAAASSGQS EVYENGSSGD GDTSEDMMFE IQNPRKSEIS IQQGRPNLHE DKDYHGLWSN  300
SSSFFASSRE AWLNGKPRDC GGNIPSLEDM DPKCLNSSNL SETSPKKPNL EFTLGTPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-86	G2-like family protein