PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028067619.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 280aa MW: 31179.6 Da PI: 6.1368

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028067619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.4e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++v+++G+g +W + +++ g++R++k+c++rw++yl XP_028067619.1 14 RGPWSPEEDITLKNYVERFGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	43.8	6.1e-14	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T eEd++++ + + G++ W+ Ia++++ gRt++++k++w++ XP_028067619.1 68 RGGFTVEEDDIILTLYNNIGSR-WSVIASHLQ-GRTDNDVKNYWNT 111 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGRSPCCDKT KVKRGPWSPE EDITLKNYVE RFGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPDIKRGG FTVEEDDIIL TLYNNIGSRW SVIASHLQGR TDNDVKNYWN TKLKKKLLPL 120 PPTENNSNNT STITTNNNAS YFSSSTASSP LVTNLDTNTY HSHGNSIFSN NMISASFQPA 180 MNVNYQQKFL PQGLVSEEPV VQSSLPRFIE VSEIGSSAAD GSTFRGISLS EEVASFSDIE 240 NKYGLWSGNG GGEDEDNDDR WLMDLLGSSF SYDLLNSFGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	4e-66	MYB family protein