PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067917.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 347aa    MW: 40689.3 Da    PI: 7.6694
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.21.1e-171811089
            FAR1 10 vGFsvrkskskkskrngeitkrtfv.CskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                    +GF++r+++++ks+++g +++r+fv C keg++e++k      ++++ +trt+C+a + v++++  +kw v+k++ +HnH+l
  XP_028067917.1  1 MGFDIRRDYHSKSRKDGAMINRKFVfCCKEGEKEKDKWY-MIVNHPKHKTRTKCNAFMYVSLDRdLSKWIVKKFDDNHNHHL 81
                    7***********************88*********9999.99999******************9899*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MGFDIRRDYH SKSRKDGAMI NRKFVFCCKE GEKEKDKWYM IVNHPKHKTR TKCNAFMYVS  60
LDRDLSKWIV KKFDDNHNHH LHFPQCTHLI PSQRKLCQAQ ALKVDIANDT GISLKASHDL  120
ISALAGGKEN LRFTREDQKS YLRGKRQRNL QYGEAGSLLR YFQQQAAENP YFYYAIQLDV  180
DEMITNIFWV DHEMITDYEL FGDAVSFDTT FQTNKEYRPL ALFTVFNHFR KTVIFGVSLL  240
YDETTASFEW LFETFLHAMS GKKPTSFFTD QDQVITKAIS EVMPKVFHGL CTFHLMQNAL  300
KHLGYLYKSG SKFGSDFKTC IFGYEDEHEL IDAWDSLIDK YNLHENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-67FAR1 family protein