PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028067928.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 164aa    MW: 18248.7 Da    PI: 7.5571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028067928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.1e-104383954
                    HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     r RR+ri ++f  L++l+P  a      K++ +++Le+A++Y+k L
  XP_028067928.1 43 ARERRHRISDRFKVLQSLVPGgA------KMDTVSMLEEAIHYVKFL 83
                    699*****************966......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDCSSSYYAH SSSLSTPVKA NNGNNKKRTK PVKLSTDPQS VAARERRHRI SDRFKVLQSL  60
VPGGAKMDTV SMLEEAIHYV KFLKTQIWLH QTMIKFLKNG EFDDDPTTDL ILPPSSVTQQ  120
QQQWVCSPED LVVGHEVQSA VRVGFPGCGF GGEEIMGFDG SINY