PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068007.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 977aa MW: 108857 Da PI: 7.8192

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.3	9.7e-56	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei+++L n+ek++lt e++ rp+ gsl+L++rk++ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fqr XP_028068007.1 20 QEaQHRWLRPAEICEVLRNHEKFHLTPEPPIRPPAGSLFLFDRKVLRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNENFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+L+ ele+ivlvhy+evk XP_028068007.1 115 RSYWMLDGELENIVLVHYREVK 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 977 aa Download sequence
MAETRRYVPI QPLNLEQILQ EAQHRWLRPA EICEVLRNHE KFHLTPEPPI RPPAGSLFLF 60 DRKVLRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML 120 DGELENIVLV HYREVKEGSK LGGSRLLNAD PGSQFGSPEV SSAPCSEQTN SPIPTGQTSY 180 TSSPNSINWN ERNFFSAFNG NPEGDPTNAS SSGTSPLAQP IHVSVNASAP ANEATGFQEL 240 SRVHLDAGFV GAGFNHGTSS FICADICGSR GNLSSTDARL DADNTVQDVS CGDRLIPDGQ 300 RTAQEHDFNQ PQYQNHSGSQ AIGTSTPKVD AQVAGANNVE AGELKKLDSF GRWMDKEMGG 360 DCDDSLMASD SGNYWNTLDT ENDDKEVSSL SRQMQLDIDS LGPSLSQEQL FSICDFAPDW 420 AYSGIETKVL ITGTFLGDKK HSGSLKWCCM FGEIEVAAEV LTDSVIRCQV PFHAPGRVPF 480 YITCSNRLAC SEVREFKYLE KLSEVASSAN AKSAPEDEMR FQIQLAKMLY AGSGKNRFDC 540 SMVECDKCKL EKDLNSFKID IQNDWKRIEH AVMMFEGYNV SPSDILIQNL LKNRLYEWLI 600 CKVHEVKGPH ILDNEGQGVI HLAATLGYVW AVGLIVAAGV SPNFRDARGR TALHWASYYG 660 REETVVALIR LGAAAGAVDD PTPAFPGGQT AADLASSRGH KGIAGYLAEA DLTSHLLSLT 720 LRDNSTNSVA AGMAAENAME SAAQNIFSPD RAIDEKHSLR RSLAAVRKSA HAAALLQAAF 780 RARSFRHRQL TKSSDDISEA SLDLVALGSL NKVQKVSHFD DYLHSAAIKI QQKYRGWKGR 840 KEFLKIRNRI MKIQAHVRGH QVRKQYKKFI WSVGIVEKAI LRWRRKGHGL RGFRRENTIE 900 NVVPETQKND EYEFLRIGRK QKVAGVVKAL ARVQSMVRHP EACDQYSRLV TKFENFKLSN 960 EVASESDKLK VQKEIDR

Sequence ? help Back to Top

Protein Sequence Length: 977 aa Download sequence

MAETRRYVPI QPLNLEQILQ EAQHRWLRPA EICEVLRNHE KFHLTPEPPI RPPAGSLFLF  60
DRKVLRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
DGELENIVLV HYREVKEGSK LGGSRLLNAD PGSQFGSPEV SSAPCSEQTN SPIPTGQTSY  180
TSSPNSINWN ERNFFSAFNG NPEGDPTNAS SSGTSPLAQP IHVSVNASAP ANEATGFQEL  240
SRVHLDAGFV GAGFNHGTSS FICADICGSR GNLSSTDARL DADNTVQDVS CGDRLIPDGQ  300
RTAQEHDFNQ PQYQNHSGSQ AIGTSTPKVD AQVAGANNVE AGELKKLDSF GRWMDKEMGG  360
DCDDSLMASD SGNYWNTLDT ENDDKEVSSL SRQMQLDIDS LGPSLSQEQL FSICDFAPDW  420
AYSGIETKVL ITGTFLGDKK HSGSLKWCCM FGEIEVAAEV LTDSVIRCQV PFHAPGRVPF  480
YITCSNRLAC SEVREFKYLE KLSEVASSAN AKSAPEDEMR FQIQLAKMLY AGSGKNRFDC  540
SMVECDKCKL EKDLNSFKID IQNDWKRIEH AVMMFEGYNV SPSDILIQNL LKNRLYEWLI  600
CKVHEVKGPH ILDNEGQGVI HLAATLGYVW AVGLIVAAGV SPNFRDARGR TALHWASYYG  660
REETVVALIR LGAAAGAVDD PTPAFPGGQT AADLASSRGH KGIAGYLAEA DLTSHLLSLT  720
LRDNSTNSVA AGMAAENAME SAAQNIFSPD RAIDEKHSLR RSLAAVRKSA HAAALLQAAF  780
RARSFRHRQL TKSSDDISEA SLDLVALGSL NKVQKVSHFD DYLHSAAIKI QQKYRGWKGR  840
KEFLKIRNRI MKIQAHVRGH QVRKQYKKFI WSVGIVEKAI LRWRRKGHGL RGFRRENTIE  900
NVVPETQKND EYEFLRIGRK QKVAGVVKAL ARVQSMVRHP EACDQYSRLV TKFENFKLSN  960
EVASESDKLK VQKEIDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein