PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068135.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 130aa    MW: 14696.4 Da    PI: 4.6349
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.81.1e-2036105172
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                     +fYn+Y  +vGFs+rk++ +ks ++geit+rtfvCskeg r+++k++    r +raetrtgC+a + +k+ +
  XP_028068135.1  36 EFYNSYEGRVGFSIRKEYAHKS-KTGEITSRTFVCSKEGLRKSDKRD-FAVRIPRAETRTGCDALMSIKLIS 105
                     6******************999.7888*****************999.9999****************9874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MDDLTIATQI DVHGEDDTQC KSILGMEFDS EQLAYEFYNS YEGRVGFSIR KEYAHKSKTG  60
EITSRTFVCS KEGLRKSDKR DFAVRIPRAE TRTGCDALMS IKLISGPGGV RSVLGKFIDE  120
YEEEEEFFAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-16FAR1 family protein