PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068334.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 418aa MW: 48054.2 Da PI: 6.9269

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	131.7	5.2e-41	63	187	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppG+rF P d+el+ +yLk kv++++l+ +++k+v++y+++P + ++ +e+ewyfF++rd+ky +g+r++r++ gyWkatg dk+++ XP_028068334.1 63 PPGYRFCPFDHELI-HYLKLKVADQPLPD-DMFKDVNLYSHNPDYFTeRHGPLGEREWYFFTPRDRKYLKGSRPSRKAGYGYWKATGADKPIKL- 154 9***********.*******999.99**********8344445999**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+++g kk+Lvfy g+ pkg ktdW+mhe+rl XP_028068334.1 155 NGNTIGYKKSLVFYLGKPPKGDKTDWIMHEFRL 187 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MAFPTQNQPK VEATVRTQNV DNSPTHQAQD EEEEQNYSYY SSSIGTIVAL NEPQTHHIAQ 60 KYPPGYRFCP FDHELIHYLK LKVADQPLPD DMFKDVNLYS HNPDYFTERH GPLGEREWYF 120 FTPRDRKYLK GSRPSRKAGY GYWKATGADK PIKLNGNTIG YKKSLVFYLG KPPKGDKTDW 180 IMHEFRLNAP PRRRKNANDM RLDDWVLCRV YKKHRKSNKA KQDHPDDLNN YSVPAVALSD 240 ENAPCVNNDN NVAEMNWDYN NSIGESNQLI INSCNDFFGS ASLDELGMHH FTDPYPTSSH 300 TQSPFQNEFL QTPPQFTDYA SLPNFSMPPQ QPTTSFNSGS RANASTIPFM SRYREKEENG 360 WDSRTRKPQE DDAWSFGKLH KHVGLNDFAF SNYVDPYPSV DNLQLNNAPG SPSLPKSM

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MAFPTQNQPK VEATVRTQNV DNSPTHQAQD EEEEQNYSYY SSSIGTIVAL NEPQTHHIAQ  60
KYPPGYRFCP FDHELIHYLK LKVADQPLPD DMFKDVNLYS HNPDYFTERH GPLGEREWYF  120
FTPRDRKYLK GSRPSRKAGY GYWKATGADK PIKLNGNTIG YKKSLVFYLG KPPKGDKTDW  180
IMHEFRLNAP PRRRKNANDM RLDDWVLCRV YKKHRKSNKA KQDHPDDLNN YSVPAVALSD  240
ENAPCVNNDN NVAEMNWDYN NSIGESNQLI INSCNDFFGS ASLDELGMHH FTDPYPTSSH  300
TQSPFQNEFL QTPPQFTDYA SLPNFSMPPQ QPTTSFNSGS RANASTIPFM SRYREKEENG  360
WDSRTRKPQE DDAWSFGKLH KHVGLNDFAF SNYVDPYPSV DNLQLNNAPG SPSLPKSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	195	PRRRK
2	192	221	RRRKNANDMRLDDWVLCRVYKKHRKSNKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	5e-54	NAC family protein