PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068417.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 289aa    MW: 31883 Da    PI: 9.1258
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.9e-143478147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_028068417.1 34 RESWTEEEHDKFIEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 78
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MNSSSPNPQS MANSTPTDSS GKKVRKPYTI TKSRESWTEE EHDKFIEALQ LFDRDWKKIE  60
DFVGSKTVIQ IRSHAQKYFL KVQKNGTIAH VPPPRPKRKA AHPYPQKAPK NVLAPLQAFM  120
AYPSSLNSLA PGYSPWDDTS MLIHSPSGGI MLSQDEYNLH GVEADIGLKG AARISNSGID  180
GTGSLSRTIS SSELSKQGKP GSLFHGIPDF AEVYSFMGSV FDPDTQGHVQ KLKEMDPINF  240
ETALLLMRNL TINLSSPDFE PIREVLSSYD VNSKTVGIAT GNVMKNQEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-107MYB_related family protein