PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068484.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 345aa    MW: 40204.9 Da    PI: 6.5147
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR143.41.1e-1337123291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY +YAk+vGFs+  +++    +++e       Cs+ gkr+++ +   +  +++ +t+++ k +++v+++kd ++++t+++l+HnH+l p
  XP_028068484.1  37 FYTKYAKHVGFSIAYKTQVCG-DDRELRYFGIECSRLGKRTKKLEI--NPLKPSLSTKIDYKVRVRVTLQKDWRFMLTTVNLDHNHDLIP 123
                     9*************9988776.888899*************99887..8999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEIDSNSGEN SLLNESEKVE EPKRDMCFSS KQEVYTFYTK YAKHVGFSIA YKTQVCGDDR  60
ELRYFGIECS RLGKRTKKLE INPLKPSLST KIDYKVRVRV TLQKDWRFML TTVNLDHNHD  120
LIPTDSCHFA MNKKILTLVK KRLEINDQVG IGVSKNYNSM VVEAGGYESL TFDERDARNN  180
IDRARRMRLG EGDAVTLQKY FLRMHAQNSS FYYMIDVDTD FRIRNLFWAD AMSQATYEEF  240
GDIVSFDITY LTNKYDMLFA LFIVVNHYGQ LILLGCGLLS SEDTDTFVWL FKAWLNCMSD  300
YPPKAIITES YAKCYRNCLP KYLTSMVFMA YNEENSGEIE RPFPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.19e-50FAR1 family protein