PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068607.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 225aa MW: 24997.8 Da PI: 8.3305

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.3e-18	32	77	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEd++l ++v ++G ++W++I++++ gR++k+c++rw + XP_028068607.1 32 KGPWSSEEDKILTRLVDRYGARNWSLISKYIK-GRSGKSCRLRWCNQ 77 79***************************9.*********985 PP
2	Myb_DNA-binding	55.7	1.1e-17	86	128	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a+ q+G++ W+tIar ++ gRt++ +k++w++ XP_028068607.1 86 PFSQAEDETILAAHSQYGNR-WATIARLLP-GRTDNAVKNHWNST 128 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MEAFNRCSSV TSSSSDSSSS DHSMSNRAEK IKGPWSSEED KILTRLVDRY GARNWSLISK 60 YIKGRSGKSC RLRWCNQLSP NVEHRPFSQA EDETILAAHS QYGNRWATIA RLLPGRTDNA 120 VKNHWNSTLK RRQQQPMERM DGGDLVVGGG GSSSGSGSFV NMNTDESDPM TTLSLAPPGV 180 GGCGMPERRR GEEVPAEFWD VMREVIAREV RDYVTTSFPE ASGFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	2e-56	MYB family protein