PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068809.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 407aa MW: 47187.8 Da PI: 8.0703

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.6	8.4e-23	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GFsvr+s+++ + +n+ + +r++vCs+eg re++ + e+ r++raetr C+a ++v+ +k k++vt+++ eHnH+la XP_028068809.1 65 FYNAYAKVIGFSVRRSRKRITGDNKFVESRKWVCSREGVREKKYLQrVERVRTPRAETRLFCNAAFRVRYDKtARKYVVTHFVGEHNHPLA 155 ***************************************9988846777889*************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVRRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA 120 ETRLFCNAAF RVRYDKTARK YVVTHFVGEH NHPLAAPHYV PFLWSLRFVT SADQAQAKAM 180 RNVGMKTSQI MDFMVHQSGG YEKVGFIHRD LHNQFQAERK VQLAERDAEG ALGYLSAKLD 240 ADPLFFFKYN VDKDNRLDKI FWADCRSRMD YAAFGDVLVF DTTYHTNAYK KPFVILAGVS 300 NHFITTIFGC ALLPDETMET YTWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR 360 HRLCSWHLEK NASTNVHIPE FTTDFAQLML KKCKIDEFDN AWAAMVK

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDEPESSRPE EVNTEIDDQF ALDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVRRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA  120
ETRLFCNAAF RVRYDKTARK YVVTHFVGEH NHPLAAPHYV PFLWSLRFVT SADQAQAKAM  180
RNVGMKTSQI MDFMVHQSGG YEKVGFIHRD LHNQFQAERK VQLAERDAEG ALGYLSAKLD  240
ADPLFFFKYN VDKDNRLDKI FWADCRSRMD YAAFGDVLVF DTTYHTNAYK KPFVILAGVS  300
NHFITTIFGC ALLPDETMET YTWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR  360
HRLCSWHLEK NASTNVHIPE FTTDFAQLML KKCKIDEFDN AWAAMVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-65	FAR1 family protein