PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068926.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 253aa    MW: 28544.6 Da    PI: 8.4732
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.2e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l+ +++++G  +W+  a+  g+ R++k+c++rw +yl
   XP_028068926.1 14 KGIWSPEEDQKLITYIRRHGIWNWSEMAKPAGLLRSGKSCRLRWVNYL 61
                     678*****************99**********99************97 PP
2Myb_DNA-binding50.45e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E+e +++ +++lG++ W++Ia+ ++ gRt++++k++w+++l
   XP_028068926.1  67 RGNFTRGEEETILKMHEKLGNK-WSAIAAALP-GRTDNEVKNYWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MVRTRRCEKT GLKKGIWSPE EDQKLITYIR RHGIWNWSEM AKPAGLLRSG KSCRLRWVNY  60
LRPDLKRGNF TRGEEETILK MHEKLGNKWS AIAAALPGRT DNEVKNYWHT HLKKRLHKPA  120
QLKTSKAESN QNNLPELNLL LPNPPEASSS SDGSRNIPAL LPSTTGPAIG NVEAYIGSQT  180
CIELQSLSEM EKLYMENLQG TLVDPGFILP HSELWCLDPA SLYCFENDAN SDLLFNLSLP  240
GEIGGIKEPN VHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-56MYB family protein