PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028068989.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 241aa MW: 27956.2 Da PI: 9.8828

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028068989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	1.9e-15	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++++ G g W+ ++ + g++R++k+c++rw++yl XP_028068989.1 10 KGAWTEEEDNLLKKCIETNGEGKWHQVPFKAGLNRCRKSCRLRWLNYL 57 79********************************************97 PP
2	Myb_DNA-binding	47.4	4.3e-15	63	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ +E +l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l XP_028068989.1 63 RGSFGVDEVDLIVRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 108 789999**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEGVPLGVRK GAWTEEEDNL LKKCIETNGE GKWHQVPFKA GLNRCRKSCR LRWLNYLRPN 60 IKRGSFGVDE VDLIVRLHKL LGNRWSLIAG RLPGRTANDV KNYWNTHLQK KLIPQIEVVK 120 VKTPRMMETK AIRPRPRTFS KNLIWLKSKT TAIANIETRN NLFKQLSPPL SPPRDDGISW 180 WENMFVDLEI NKEITLSIDG SNEEKWHEKE TQGILAIGDS SVQGESDWND IFIDKMDLWD 240 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-62	MYB family protein