PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028068990.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 254aa    MW: 29316.6 Da    PI: 9.2717
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028068990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.79.6e-171360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd ll+++++q+G g W+ I+++ g++R++k+c++rw++yl
   XP_028068990.1 13 KGAWTGEEDSLLKKCIEQYGEGMWHQIPSRAGLNRCRKSCRLRWLNYL 60
                     79********************************************97 PP
2Myb_DNA-binding47.34.7e-1566110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T +E +l++++ k+lG++ W++Ia +++ gRt++++k++w++ 
   XP_028068990.1  66 RGNFTMDEVDLIIKLQKLLGNR-WSLIAGRLP-GRTANDVKNYWNTN 110
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDSVCCVPLG VRKGAWTGEE DSLLKKCIEQ YGEGMWHQIP SRAGLNRCRK SCRLRWLNYL  60
RPNIKRGNFT MDEVDLIIKL QKLLGNRWSL IAGRLPGRTA NDVKNYWNTN LQKKLITQRE  120
KVKAKTQEKM ETIIIRPRPR IISKNQPRLM DKTAIIENIR TRDNLSEPFP LPLPLPPSRD  180
DGISWDNIVV NSKINNGITW SANGLIEEGN IGNWYEKIRP GTHTSCGNFI DEDQSDWSDI  240
FFNNVNLWDL LGDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-57MYB family protein