PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069024.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 330aa    MW: 37179.4 Da    PI: 5.2945
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-11162205654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N+++  Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_028069024.1 162 LMAERRRRKRLNDRLLMLRSIVPKiS------KMDRTSILGDTIDYMKEL 205
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MELTQHGLLE DLLAPTRDSW TSFPPGVNDY LSNGWTIESF NQSQIFSTPN SPFLGFHSPL  60
EPNFPCPLNG LYPFVGGFSV PEIGSSYDKN GTLPFPIQEH YPSMEDGEYG LVGNDLHSLE  120
ERMNSCKVEI EPTTNIPVFN EGVCGEKKSR VRKVEGQPSK NLMAERRRRK RLNDRLLMLR  180
SIVPKISKMD RTSILGDTID YMKELLEKVK NLRKEDRGAD MNQVNLMGNY KELKPNEPLV  240
MNSTKFDVVR TNIDTRIEVC SAAKPGLLLS TINTLEALGL DIQQCVISCF NDFSMQASCS  300
EGMEQRTMMS TEDIIKQALY RNAGYGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165172ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.18e-73bHLH family protein