PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069064.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 199aa    MW: 23531.5 Da    PI: 5.0722
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.61.4e-182666345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      W++eE+ +l+++++qlG++ W++Iar+m+ gRt++ +k++w+
   XP_028069064.1 26 IWSEEEEMKLIEVHRQLGNK-WAAIAREMP-GRTENTIKNHWN 66
                     6*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MLNGRMGKQC RERWHNHLRP DIKKDIWSEE EEMKLIEVHR QLGNKWAAIA REMPGRTENT  60
IKNHWNATKR RQISKRKRQY SSLLQDYIKS LPSDSTVTDG QESLSSDSIL RIIDNTDLEE  120
DNKDQKDPTS HSDKAVDYQI YEKMAVEEDD FGSMHNESYK VKLEMEMEMM PAELMDKEMS  180
FDVNNKDMDL LEMHCQGIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16978KRRQISKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.14e-44MYB family protein