PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069071.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 167aa    MW: 18948.8 Da    PI: 9.6114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27e-091261354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                     + ne+E+ RR ++++ +++L +l+ k+   ps+  l   ++Le+A++Y+ +L
  XP_028069071.1 12 LNRNEIEKSRRLQLKDLYSKLASLILKQ---PSEEgLPLRDMLEQATKYVVEL 61
                    578************************8...78888*************8665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MQPRGSGSSS KLNRNEIEKS RRLQLKDLYS KLASLILKQP SEEGLPLRDM LEQATKYVVE  60
LKQNVEELKR RKATLKGDEG GSEERLPVLM VRHMGSTLEV NLSTGLDKKF KLHEVLSVLK  120
EEGLEVVSAS YSTVGNQTFY TIHAQILYSR IGIETSRMHE RLEGLIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.15e-33bHLH family protein