PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069108.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 268aa    MW: 30840.6 Da    PI: 8.8834
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.62e-1337123291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY +YAk+ GF +   ++++  +++e +     C +  +r+++ +   +  +++ +++ +Ckak++ +++kd ++++t+++leH+H+l+p
  XP_028069108.1  37 FYAKYAKHFGFAIAYGTQNYG-NDEELKYFGIECIRTRTRRKRLEV--NPLEPSLSSKNDCKAKVRGSLQKDRTFKLTTVVLEHTHDLVP 123
                     9***************99997.88889***********99998866..9999***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEGSNNPSEE VQEPKSGEVE EPKQGMYFSS KQEVYAFYAK YAKHFGFAIA YGTQNYGNDE  60
ELKYFGIECI RTRTRRKRLE VNPLEPSLSS KNDCKAKVRG SLQKDRTFKL TTVVLEHTHD  120
LVPTDSRHFA MNKRIFTPVK RRLEINDEAG IGVAKNFHSI VVEARGYEAL TFDERDAGNH  180
IEKARRLRLR VGDAESDALY FHRMQQQNSN FYSAMDFDGE GRLRNLFWAD ARGRAAYKAF  240
GDVVTFDTTY LTNKYGMLFV SFVGVNHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.27e-35FAR1 family protein