PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028069404.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 164aa    MW: 18980.7 Da    PI: 9.4591
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028069404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.21.4e-091121643087
            FAR1  30 krtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 
                     k  f+C ++gk++++kk+      ++++++++C  +++ +k+k+g w + k++  HnH
  XP_028069404.1 112 KIYFRCERHGKSAKKKKN-----GQTSSKKCNCPFQIVGSKKKNGIWSLRKIDGSHNH 164
                     4579**********9988.....89999****************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MIYFRYSFFS SIDNCSQHLK VFKGFMSCFI FFIIPLQKEG LICLDIVHEH SRTQHDVSTQ  60
GGEVPSNDFV DSTEQFTPEG VLYDKDQFVR WARDVYKNDG VVLVIRSSKD DKIYFRCERH  120
GKSAKKKKNG QTSSKKCNCP FQIVGSKKKN GIWSLRKIDG SHNH